About

Web Applications/Scientific Tools

Help

This program inputs sequence data from a PROSITE scan and outputs a count of amino acid positions.

Inputs

1. prosite scan ID: The ID that PROSITE gives your data run. for instance; 830150526146.scan.gz

2. Raw prosite aligned sequence text: from the link on prosite search "shaded alignment of hits", copy and paste the alignment page into the text box.

Start Over (click me)

Please enter the alignment from the prosite results:

Please enter prosite scan id:

Covariance Output:

Sorting Preferance: (does not work yet)

4 After NNAG

Last 6 Before [YSM]

3 or 4 Between P and [TS]

6 After T

Main Output Type:
Fingerprint Cutoff: %