>NC_002645_HCoV-229E_inf-1_M_24995..25672_678bp_225aa
MSNDNCTGDIVTHLKNWNFGWNVILTIFIVILQFGHYKYSRLFYGLKMLVLWLLWPLVLA
LSIFDTWANWDSNWAFVAFSFFMAVSTLVMWVMYFANSFRLFRRARTFWAWNPEVNAITV
TTVLGQTYYQPIQQAPTGITVTLLSGVLYVDGHRLASGVQVHNLPEYMTVAVPSTTIIYS
RVGRSVNSQNSTGWVFYVRVKHGDFSAVSSPMSNMTENERLLHFF
>NC_005831_HCoV-NL63_AmsterdamI_M_25442..26122_681bp_226aa
MSNSSVPLLEVYVHLRNWNFSWNLILTLFIVVLQYGHYKYSRLLYGLKMSVLWCLWPLVL
ALSIFDCFVNFNVDWVFFGFSILMSIITLCLWVMYFVNSFRLWRRVKTFWAFNPETNAII
SLQVYGHNYYLPVMAAPTGVTLTLLSGVLLVDGHKIATRVQVGQLPKYVIVATPSTTIVC
DRVGRSVNETSQTGWAFYVRAKHGDFSGVASQEGVLSEREKLLHLI
>NC_002306_TGEV_PUR46-MAD_M_26116..26904_789bp_262aa
MKILLILACVIACACGERYCAMKSDTDLSCRNSTASDCESCFNGGDLIWHLANWNFSWSI
ILIVFITVLQYGRPQFSWFVYGIKMLIMWLLWPVVLALTIFNAYSEYQVSRYVMFGFSIA
GAIVTFVLWIMYFVRSIQLYRRTKSWWSFNPETKAILCVSALGRSYVLPLEGVPTGVTLT
LLSGNLYAEGFKIAGGMNIDNLPKYVMVALPSRTIVYTLVGKKLKASSATGWAYYVKSKA
GDYSTEARTDNLSEQEKLLHMV
>NC_003436_PEDV_CV777_M_25682..26362_681bp_226aa
MSNGSIPVDEVIEHLRNWNFTWNIILTILLVVLQYGHYKYSVFLYGVKMAILWILWPLVL
ALSLFDAWASFQVNWVFFAFSILMACITLMLWIMYFVNSIRLWRRTHSWWSFNPETDALL
TTSVMGRQVCIPVLGAPTGVTLTLLSGTLLVEGYKVATGVQVSQLPNFVTVAKATTTIVY
GRVGRSVNASSGTGWAFYVRSKHGDYSAVSNPSAVLTDSEKVLHLV
>DQ811787_PRCV_ISU-1_M_25083..25868_786bp_261aa
MKILLILACAIACACGERYCAMQETGLSCRNSTVSDCESCFNGGDLIWHLANWNFSWSII
LIIFITVLQYGRPQFSWFVYGIKMLIMWLLWPIVLALTIFNAYSEYQVSRYVMFSFSIAG
AIVTFVLWIMYFVRSIQLYRRTKSWWSFNPETNAILCVSALGRSYVLPLEGVPTGVTLTL
LSGNLYAEGFKIAGGMNIDNLPKYVMVALPSRTIVYTLVGKKLKASSATGWAYYVKSKAG
DYSTEARTDNLSEQEKLLHMV
>AY994055_FIPV_79-1146_M_26213..27001_789bp_262aa
MKYILLILACIIACVYGERYCAMQDSGLQCINGTNSRCQTCFERGDLIWHLANWNFSWSV
ILIVFITVLQYGRPQFSWLVYGIKMLIMWLLWPIVLALTIFNAYSEYQVSRYVMFGFSVA
GAVVTFALWMMYFVRSVQLYRRTKSWWSFNPETNAILCVNALGRSYVLPLDGTPTGVTLT
LLSGNLYAEGFKMAGGLTIEHLPKYVMIATPSRTIVYTLVGKQLKATTATGWAYYVKSKA
GDYSTEARTDNLSEHEKLLHMV
>NC_009657_BtCoV-G1_BtCoV/512/2005_M_25678..26361_684bp_227aa
MSSNQSVPVEEVIKHLRNWNFSWNIILTILLVVLQYGHYKYSRVLYGLKMAILWLLWPLV
LALSIFDAWASFNVNWVFFAFSILMACVTAVLWIMYFVNSIRLWRRTHSWWSYNPETDSI
LSVSVLGRHVCLPILGAPTGVTLTLLNGTLLVEGYQVATGVQVNNLPGYVTVAKASTTIV
YQRVGRSMNANSSTGWAFFVKSKHGDYYAAANPTEVVTDSEKILHLV
>EF203064_Bat-CoV-HKU2_HKU2/GD/430/2006_M_24768..25457_690bp_229aa
MSSNSTESVPVTEVLEHLRNWNFSWNIILTVFIAVLQYGNMKYSFFLYGVKMLIMWLLWP
LVIALSIFNAYADFGVNWWFFSFSILMLVITLVLWLMYIINSFKLYRRTRTFWAFNPETD
AIAVISVFGRSYSIPMPVAPTGITLTILSGTLFFDGIRIATGVQPAHLPQFVTVAKPGTT
IIYTRAGRSLNASTNTGWAFYVRSKHGDYSALSNSSDNLTENDRLLHLV
>NC_005147_HCoV-OC43_OC43_M_28402..29094_693bp_230aa
MSSKTTPAPVYIWTADEAIKFLKEWNFSLGIILLFITIILQFGYTSRSMFVYVIKMIILW
LMWPLTIILTIFNCVYALNNVYLGLSIVFTIVAIIMWIVYFVNSIRLFIRTGSFWSFNPE
TNNLMCIDMKGTMYVRPIIEDYHTLTVTIIRGHLYIQGIKLGTGYSLADLPAYMTVAKVT
HLCTYKRGFLDRISDTSGFAVYVKSKVGNYRLPSTQKGSGMDTALLRNNI
>NC_006577_CoV-HKU1A_N1_M_27633..28304_672bp_223aa
MNKSFLPQFTSDQAVTFLKEWNFSLGVILLFITIILQFGYTSRSMFVYLIKMIILWLMWP
LTITLTIFNCFYALNNAFLAFSIVFTIISIVIWILYFVNSIRLFIRTGSWWSFNPETNNL
MCIDMKGKMFVRPVIEDYHTLTATVIRGHLYIQGVKLGTGYTLSDLPVYVTVAKVQVLCT
YKRAFLDKLDVNSGFAVFVKSKVGNYRLPSSKPSGMDTALLRA
>AY884001_CoV-HKU1B_N2_M_27522..28193_672bp_223aa
MNESIFPHWNSDQAITFLKEWNFSLGVILLLITIILQFGYTSRSMFVYLIKMIILWLMWP
LTIILTIFNCFYALNNIFLGLSILFTIISIVIWILYFVNSIRLFIRTGSWWSFNPETNNL
MCIDMKGKMYVRPVIEDYHTLTATVIRGHLYIQGVKLGTGYTLADLPVYVTVAKVQVLCT
YKRAFLDKLDVNSGFAVFVKSKVGNYRLPSSKSSGMDTALLRA
>DQ339101_CoV-HKU1C_N5_M_27462..28133_672bp_223aa
MNESIFPHWNSDQAITFLKEWNFSLGVILLLITIILQFGYTSRSMFVYLIKMIILWLMWP
LTIILTIFNCFYALNNVFLGLSILFTIISIVIWILYFVNSIRLFIRTGSWWSFNPETNNL
MCIDMKGKMYVRPVIEDYHTLTATVIRGHLYIQGVKLGTGYTLADLPVYVTVAKVQVLCT
YKRAFLDKLDVNSGFAVFVKSKVGNYRLPSSKSSGMDTALLRA
>NC_003045_BCoV_BCoV-ENT_M_28691..29383_693bp_230aa
MSSVTTPAPVYTWTADEAIKFLKEWNFSLGIILLFITVILQFGYTSRSMFVYVIKMVILW
LMWPLTIILTIFNCVYALNNVYLGFSIVFTIVAIIMWIVYFVNSIRLFIRTGSWWSFNPE
TNNLMCIDMKGRMYVRPIIEDYHTLTVTIIRGHLYMQGIKLGTGYSLSDLPAYVTVAKVS
HLLTYKRGFLDKIGDTSGFAVYVKSKVGNYRLPSTQKGSGLDTALLRNNI
>NC_001846_MHV_MHV-A59_M_28968..29654_687bp_228aa
MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSMFIYVVKMIIL
WLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIMYFVNSIRLFIRTGSWWSFNP
ETNNLMCIDMKGTVYVRPIIEDYHTLTATIIRGHLYMQGVKLGTGFSLSDLPAYVTVAKV
SHLCTYKRAFLDKVDGVSGFAVYVKSKVGNYRLPSNKPSGADTALLRI
>NC_007732_PHEV_VW572_M_28141..28833_693bp_230aa
MSSPTTPVPVISWTADEAIKFLKEWNFSLGIIVLFITIILQFGYTSRSMFVYVIKMVILW
LMWPLTIILTIFNCVYALNNVYLGFSIVFTIVAIIMWVVYFVNSIRLFIRTGSWWSFNPE
TNNLMCIDMKGRMYVRPIIEDYHTLTATIIRGHLYIQGIKLGTGYSLSDLPAYVTVAKVT
HLCTYKRGFLDRIGDTSGFAVYVKSKVGNYRLPSTHKGSGMDTALLRNNI
>EF424621_AntelopeCoV_US/OH1/2003WD1418_M_28675..29367_693bp_230aa
MSSVTTPAPVYTWTADEAIKFLKEWNFSLGIILLFITVILQFGYTSRSMFVYVIKMIILW
LMWPLTIILTIFNCVYALNNVYLGFSIVFTIVAIIMWIVYFVNSIRLFIRTGSWWSFNPE
TNNLMCIDMKGRMYVRPIIEDYHTLTVTIIRGHLYMQGIKLGTGYSLSDLPAYVTVAKVS
HLLTYKRGFLDKIGDTSGFAVYVKSKVGNYRLPSTQKGSGLDTALLRNNI
>EF424622_GiCoV_US/OH3-TC/2006_M_28659..29351_693bp_230aa
MSSVTTPAPVYTWTADEAIKFLKEWNFSLGIILLFITVILQFGYTSRSMFVYVIKMIILW
LMWPLTIILTIFNCVYALNNVYLGFSIVFTIVAIIMWIVYFVNSIRLFIRTGSWWSFNPE
TNNLMCIDMKGRMYVRPIIEDYHTLTVTIIRGHLYMQGIKLGTGYSLSDLPAYVTVAKVS
HLLTYKRGFLDKIGDTSGFAVYVKSKVGNYRLPSTQKGSGLDTALLRNNI
>NC_004718_SARS-human_Tor2_M_26398..27063_666bp_221aa
MADNGTITVEELKQLLEQWNLVIGFLFLAWIMLLQFAYSNRNRFLYIIKLVFLWLLWPVT
LACFVLAAVYRINWVTGGIAIAMACIVGLMWLSYFVASFRLFARTRSMWSFNPETNILLN
VPLRGTIVTRPLMESELVIGAVIIRGHLRMAGHSLGRCDIKDLPKEITVATSRTLSYYKL
GASQRVGTDSGFAAYNRYRIGNYKLNTDHAGSNDNIALLVQ
>AY304488_SARS-civet_SZ16_M_26383..27048_666bp_221aa
MADNSTITVEELKQLLEQWNLVIGFLFLAWIMLLQFAYSNRNRFLYIIKLVFLWLLWPVT
LACFVLAAVYRINWVTGGIAIAMACIVGLMWLSYFVASFRLFARTRSMWSFNPETNILLN
VPLRGTIVTRPLMESELVIGAVIIRGHLRMAGHSLGRCDIKDLPKEITVATSRTLSYYKL
GASQRVGTDSGFAAYNRYRIGNYKLNTDHAGSNDNIALLVQ
>NC_009694_SARS-bat_HKU3-1_M_26339..27004_666bp_221aa
MADNGTITVEELKQLLEQWNLVIGFIFLAWIMLLQFAYSNRNRFLYIIKLVFLWLLWPVT
LACFVLAAVYRINWVTGGIAIAMACIVGLMWLSYFVASFRLFARTRSMWSFNPETNILLN
VPLRGTILTRPLMESELVIGAVIIRGHLRMAGHSLGRCDIKDLPKEITVATSRTLSYYKL
GASQRVGTDSGFAAYNRYRIGNYKLNTDHSGSNDNIALLVQ
>AY545919_SARS-badger_CFB/SZ/94/03_M_26377..27042_666bp_221aa
MADNSTITVEELKQLLEQWNLVIGFLFLAWIMLLQFAYSNRNRFLYIIKLVFLWLLWPVT
LACFVLAAVYRINWVTGGIAIAMACIVGLMWLSYFVASFRLFARTRSMWSFNPETNILLN
VPLRGTIVTRPLMESELVIGAVIIRGHLRMAGHSLGRCDIKDLPKEITVATSRTLSYYKL
GASQRVGTDSGFAAYNRYRIGNYKLNTDHAGSNDNIALLVQ
>NC_009019_Bat-CoV-HKU4_B04f HKU41_M_28000..28659_660bp_219aa
MSSNGSLTKDEVVNIIKDWNFSWSIIFLLITIVLQYGYPSRSMMVYVFKMFILWLLWPAS
MALSIFSAIYPISLSSQIISGILAAICAVMWLAYFVQSIRLFMRTGSWWSFNPESNCLLN
VPIGGTTVVRPLVEDSTSVTAVVNDGHLKMAGMHFGRCDYDRLPMEITVAKPSVLIALKM
VKRQSYGTNSGVAIFHRYKAGNYRRPTIIQDEELALLRA
>NC_009020_Bat-CoV-HKU5_LMH3f HKU51_M_28166..28828_663bp_220aa
MASSNVTLSNDEVLRLVKDWNFTWSVVFLLITIVLQYGYPSRSMFVYVIKMFVLWLLWPA
SMALSIFCAVYPIDLASQIISGILAATSCAMWISYFVQSIRLFMRTGSWWSFNPESNCLL
NVPIGGTTVVRPLVEDSTSVTAVVTDGYLKMAGMHFGACDFQRLPSEVTVAKPNVLIALK
MIKRQAYGTNSGVAIYHRYKAGNYRRPPIIQDQELALLRA
>NC_009021_Bat-CoV-HKU9_BF_005I HKU91_M_25689..26357_669bp_222aa
MSNNCTNTVPRPEVIAALKDWNFAVSVILLFITVLLQWGYPSRCKPIWVIKMFILWLLWP
LSIAAAVFAAIHPINSVAFGFAIAFACISGIMWLSYFISSFRLLCRTGSAWSFMPETDML
INIPLLGRTVTRPIISDSPAVQFLIIRGELRFDGFTLGRCDPGDMPDIVTIARPNALHWY
KRALTRNMYTRSAILVYIKYKVGNHRVQNTTEDGDRLAMFVA
>NC_001451_IBV_Beaudette_M_24505..25182_678bp_225aa
MPNETNCTLDFEQSVQLFKEYNLFITAFLLFLTIILQYGYATRSKVIYTLKMIVLWCFWP
LNIAVGVISCTYPPNTGGLVAAIILTVFACLSFVGYWIQSIRLFKRCRSWWSFNPESNAV
GSILLTNGQQCNFAIESVPMVLSPIIKNGVLYCEGQWLAKCEPDHLPKDIFVCTPDRRNI
YRMVQKYTGDQSGNKKRFATFVYAKQSVDTGELESVATGGSSLYT
>AY646283_IBV-partridge_Partridge/GD/S14/2003_M_24340..25017_678bp_225aa
MSNKTNCTLDSEQAILLFKEYNLFITAFLLFITILLQYGYATRSRFIYILKMIVLWCFWP
LNIAVGIISCIYPPNTGGLVAAIILTVFACLSFVGYWIQSIRLFKRCRSWWSFNPESNAV
GSILLTNGQQCNFAIESVPMVLSPIIKNGGLYCEGQWLAKCEPDHLPKDIFVCTPDRRNI
YRMVQKYTGDQSGNKKRFATFVYAKQSVDSGELESVSTSVGSLYT
>AY641576_IBV-peafowl_Peafowl/GD/KQ6/2003_M_24448..25125_678bp_225aa
MSNETNCTLDFEQSVELFKEYNLFITAFLLFLTIILQYGYATRSKFIYILKMIVLWCFWP
LNIAVGVISCIYPPNTGGLVAAIILTVFACLSFVGYWIQSIRLFKRCRSWWSFNPESNAV
GSILLTNGQQCNFAIESVPMVLSPIIKNGVLYCEGQWLAKCEPDHLPKDIFVCTPDRRNI
YRMVQKYTGDQSGNKKRFATFVYSKQSVDTGELESVATGGSSLYT
>NC_007447_BoTV-1_Breda 1_M_25758..26459_702bp_233aa
MFETNYWPFPDQAPNPFNAQVEQLSATENVYIFLTTLFGILQLVYVIFKLLCTMFPALHW
SPIWRGLENFWLFLSLASLAIAYWWLPSMTFTGYWALTIIATILVLIMLIMMFVKFVSFV
RLFYRTGSFAIAIRGPIVLVALDVTIKLHCTPFAILVKEVGNIFYLSEYCNKPLTAAQVA
ALRICVGGQWFAYTRSTTTSAAKVAAANSTAKYHLFVLQGVADYTQLSSVKFE