Target desc: NC_004718_SARS-human_Tor2_nsp12_13372..16166_shift_13398_2795bp_932aa JCMM | JCSG
Godzik Lab
BIMR
Crystallization class:  5 




Crystallization classes Help
1 Optimal
2 Suboptimal
3 Average
4 Difficult
5 Very difficult







Homologs (by PSI-BLAST)
Non-redundant NR database (NR60) 80
Solved strucutres (PDB) 3
 Comparison of target features with distributions of crystallization probabilities obtained from TargetDB Help
Protein features
Length932
Molecular weight 106500
Gravy index-0.19
Isoelectic point6.01
Instability index29.41
Predictions
Transmembrane helices (number)No
Signal peptides (length)No
Longest disorder reg.4
Longest low complexity reg. 0
Coiled coils0
% disorder residues 1
% coil residues35
% helix residues 48
% strand residues 17
Other
Number of Cys residues 31
Number of Met residues 27
Number of Trp residues 9
Number of Tyr residues 58
Number of Phe residues 55
Epsilon 280 135920
Insertions score0.05
 1...*...10....*...20....*...30....*...40....*...50....*...60....*...70....*...80....*...90....*..100
SADASTFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNEKVAGFAKFLKTNCCRFQEKDEEGNLLDSYFVVKRHTMSNYQHEETIYNLVKDCPAVAVHD

....*..110....*..120....*..130....*..140....*..150....*..160....*..170....*..180....*..190....*..200
FFKFRVDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQSLLKTVQFCDAMRDAG

....*..210....*..220....*..230....*..240....*..250....*..260....*..270....*..280....*..290....*..300
IVGVLTLDNQDLNGNWYDFGDFVQVAPGCGVPIVDSYYSLLMPILTLTRALAAESHMDADLAKPLIKWDLLKYDFTEERLCLFDRYFKYWDQTYHPNCIN

....*..310....*..320....*..330....*..340....*..350....*..360....*..370....*..380....*..390....*..400
CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA

....*..410....*..420....*..430....*..440....*..450....*..460....*..470....*..480....*..490....*..500
LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK

....*..510....*..520....*..530....*..540....*..550....*..560....*..570....*..580....*..590....*..600
SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN

....*..610....*..620....*..630....*..640....*..650....*..660....*..670....*..680....*..690....*..700
MLKTVYSDVETPHLMGWDYPKCDRAMPNMLRIMASLVLARKHNTCCNLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV

....*..710....*..720....*..730....*..740....*..750....*..760....*..770....*..780....*..790....*..800
TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDHEFVDEFYAYLRKHFSMMILSDDAVVCYNSNYAAQGLVASIKNFKAVLYYQNNVFMSEAKCW

....*..810....*..820....*..830....*..840....*..850....*..860....*..870....*..880....*..890....*..900
TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML

....*..910....*..920....*..930..
DMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ

Legend
LOOP loop secondary structure predicted by PSIPRED Download a file
HELIX helix secondary structure predicted by PSIPRED
STRAND strand secondary structure predicted by PSIPRED
DISORDER disordered region predicted by DISOPRED2 Download a file
LOW COMPLEXITY low complexity region predicted by SEG Download a file
COILS coiled coils region predicted by COILS Download a file
TRANSMEMBRANE HELICES transmembrane helices predicted by TMHMM Download a file
SIGNAL PEPTIDES signal peptites predicted by RPSP


Download
FASTA sequencetext file with protein sequence in FASTA format Download a file
Summarytext file with a summary of protein featuresDownload a file

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This server is supported by the NIH Protein Structure Initiative grants: P20 GM076221 (JCMM) and U54 GM074898 (JCSG).

Last update August 30, 2007