Coronavirus Orf7a/b

Sequence Alignments

• protein alignment JalView
• FASTA format nucleotide sequence
• FASTA format protein sequences
• FASTA format protein alignment

Structures

Orf7a

• SARS CoV Orf7a PDB 1XAK, PDBsum 1XAK
• SARS CoV Orf7a PDB 1YO4, PDBsum 1yo4
• SARS Tor2 XtalPred

Orf7b

There are no known structures of SARS Orf7b. Predicted secondary structures are available below:
• Jigsaw Prediction
• SARS Tor2 XtalPred

Domains and Families

• NCBI Conserved Domain-Orf7a
• PFAM-Orf7a
• SARS Orf7b does not have any PFAM or NCBI articles

Protein-protein interactions

Virus-virus

Virus-host

• BCL2-Like protein 2, PDB 1Mk3, Gene summary
• BCL2-related protein A1, PDB 3I1H, Gene summary
• Myeloid cell leukemia sequence 1, PDB 2KBW, Gene summary
• BCL-2-like protein 1, PDB 3IHC, Gene summary
• B-cell CLL/lymphoma 2, PDB 1GJH, Gene summary
• Small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha, PDB 2VYI, Gene summary
• Reference 1, Reference 2

Biological Pathways

• Amyotrophic lateral sclerosis (ALS)
• Viral myocarditis
• Apoptosis
• Pathways in cancer
• Focal adhesion
• Neurotrophin signaling pathway
• Colorectal cancer
• Small cell lung cancer

Other Species